Version 3.0.2 (February 2014)

This release fixes several problems reported by users as well as including some documentation updates. The “generic” distribution of the software had an error in the configuration causing it to fail to execute. The logging configuration was causing some problems for command line use. In the details screen, if your “raw data” matrix is missing […]

Powerful, flexible and simple gene set analysis.

ErmineJ performs analyses of gene sets in high-throughput genomics data such as gene expression profiling studies. A typical goal is to determine whether particular biological pathways are "doing something interesting" in an experiment that generates long lists of candidates. The software is designed to be used by biologists with little or no informatics background. ErmineJ is free software developed by the Pavlidis lab at the University of British Columbia.

ErmineJ can be downloaded here , or run ErmineJ right now using WebStart.

Major features include:

For more information see the user manual.